SNP Profiles matching TSA 656

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	TT	CC	CC	GG	TT	GG	CC	CC	AA	CT	AA	GG	AA	CC
1._RUQ_1029	TT	CC	CC	GG	CT	GG	CC	CC	AA	CT	AA	GG	AA	CC
2._RUQ_1016	_	_	AC	GG	TT	_	CC	CC	AA	CT	_	_	AA	_
3._GC-08-257-8-25	TT	CC	AC	GG	CT	GG	CC	CC	AA	CT	AA	GG	AA	CG
4._GC-08-257-8-25	TT	CC	AC	GG	CT	GG	CC	CC	AA	CT	AA	GG	AA	CG
5._GC-08-257-8-25	TT	CC	AC	GG	CT	GG	CC	CC	AA	CT	AA	GG	AA	CG
6._GC-08-257-8-25	TT	CC	AC	GG	CT	GG	CC	CC	AA	CT	AA	GG	AA	CG
7._GC-08-257-8-25	TT	CC	AC	GG	CT	GG	CC	CC	AA	CT	AA	GG	AA	CG

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	AG	AA	CC	GG	GG	CC	CC	CT	TT	GG	AG	TT	CC	CC
1._RUQ_1029	AG	AA	CC	GT	GG	CC	CC	CT	CT	GG	AG	TT	CC	CC
2._RUQ_1016	AG	AA	CC	GG	GG	CC	_	CT	_	GG	_	_	_	CC
3._GC-08-257-8-25	AG	AA	CC	GT	GG	CC	CC	CT	CT	GG	AG	TT	CC	CC
4._GC-08-257-8-25	AG	AA	CC	GT	GG	CC	CC	CT	CT	GG	AG	TT	CC	CC
5._GC-08-257-8-25	AG	AA	CC	GT	GG	CC	CC	CT	CT	GG	AG	TT	CC	CC
6._GC-08-257-8-25	AG	AA	CC	GT	GG	CC	CC	CT	CT	GG	AG	TT	CC	CC
7._GC-08-257-8-25	AG	AA	CC	GT	GG	CC	CC	CT	CT	GG	AG	TT	CC	CC

	29	30	31	32	33	34	35	36	37	38	39	40	41	42
_Input profile	CG	TT	GG	AA	CC	CC	GG	GG	TT	GT	CT	CC	TT	CG
1._RUQ_1029	CG	TT	-	AA	CC	CC	GG	GG	TT	GT	CT	CC	CT	CG
2._RUQ_1016	_	CT	_	AA	_	CT	_	_	_	GT	_	_	TT	CG
3._GC-08-257-8-25	CG	TT	GG	AA	CC	CC	GG	GG	TT	GT	TT	CC	CT	CG
4._GC-08-257-8-25	CG	TT	GG	AA	CC	CC	GG	GG	TT	GT	TT	CC	CT	CG
5._GC-08-257-8-25	CG	TT	GG	AA	CC	CC	GG	GG	TT	GT	TT	CC	CT	CG
6._GC-08-257-8-25	CG	TT	GG	AA	CC	CC	GG	GG	TT	GT	TT	CC	CT	CG
7._GC-08-257-8-25	CG	TT	GG	AA	CC	CC	GG	GG	TT	GT	TT	CC	CT	CG

	43
_Input profile	AA	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
1._RUQ_1029	AG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
2._RUQ_1016	AG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
3._GC-08-257-8-25	AG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
4._GC-08-257-8-25	AG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
5._GC-08-257-8-25	AG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
6._GC-08-257-8-25	AG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
7._GC-08-257-8-25	AG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X

Input profile: TSA_656 RUQ_1016

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

1._TSA_654 RUQ_1029

94 %
42 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

2._TSA_656 RUQ_1016

91.7 %
24 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2016

3._TSA_656 GC-08-257-8-25

90.7 %
43 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 1

Notes: 1

Mars, 2018

4._TSA_656 GC-08-257-8-25

90.7 %
43 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 2

Notes: 2

Mars, 2018

5._TSA_656 GC-08-257-8-25

90.7 %
43 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 3

Notes: 3

Mars, 2018

6._TSA_656 GC-08-257-8-25

90.7 %
43 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 6

Notes: 6

Mars, 2018

7._TSA_656 GC-08-257-8-25

90.7 %
43 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 10

Notes: 10

Mars, 2018

Key to SNP Markers

1	TcSNP75	2	TcSNP90	3	TcSNP144	4	TcSNP150	5	TcSNP151
6	TcSNP174	7	TcSNP193	8	TcSNP226	9	TcSNP230	10	TcSNP242
11	TcSNP329	12	TcSNP364	13	TcSNP372	14	TcSNP448	15	TcSNP469
16	TcSNP529	17	TcSNP534	18	TcSNP560	19	TcSNP577	20	TcSNP591
21	TcSNP602	22	TcSNP619	23	TcSNP702	24	TcSNP723	25	TcSNP731
26	TcSNP799	27	TcSNP823	28	TcSNP872	29	TcSNP878	30	TcSNP891
31	TcSNP899	32	TcSNP998	33	TcSNP999	34	TcSNP1060	35	TcSNP1063
36	TcSNP1111	37	TcSNP1126	38	TcSNP1253	39	TcSNP1309	40	TcSNP1439
41	TcSNP1442	42	TcSNP1458	43	TcSNP1484

SNP Profiles matching TSA 656

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Input profile: TSA_656 RUQ_1016

1._TSA_654 RUQ_1029

94 % 42 shared markers

2._TSA_656 RUQ_1016

91.7 % 24 shared markers

3._TSA_656 GC-08-257-8-25

90.7 % 43 shared markers

4._TSA_656 GC-08-257-8-25

90.7 % 43 shared markers

5._TSA_656 GC-08-257-8-25

90.7 % 43 shared markers

6._TSA_656 GC-08-257-8-25

90.7 % 43 shared markers

7._TSA_656 GC-08-257-8-25

90.7 % 43 shared markers

94 %
42 shared markers

91.7 %
24 shared markers

90.7 %
43 shared markers

90.7 %
43 shared markers

90.7 %
43 shared markers

90.7 %
43 shared markers

90.7 %
43 shared markers